Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator catm | VPARA_03500 | Not Available | Negative | 381348 - 382253 | 33335.9 |
| putative epimerase/dehydratase | VPARA_03510 | Not Available | Positive | 382292 - 383338 | 36650.1 |
| 2,3-diketo-l-gulonate-binding periplasmic protein yiao precursor | VPARA_03520 | Not Available | Positive | 383403 - 384374 | 35132.4 |
| sialic acid trap transporter permease protein siat | VPARA_03530 | Not Available | Positive | 384459 - 384953 | 18557.4 |
| sialic acid trap transporter permease protein siat | VPARA_03540 | Not Available | Positive | 384950 - 386227 | 44997.3 |
| hypothetical protein | VPARA_03550 | Not Available | Positive | 386366 - 386911 | 20244.5 |
| aminomethyltransferase | VPARA_03560 | Not Available | Positive | 387205 - 388383 | 41447.9 |
| glycine cleavage system h protein | VPARA_03570 | Not Available | Positive | 388424 - 388795 | 12915.1 |
| glycine dehydrogenase (decarboxylating) | VPARA_03580 | Not Available | Positive | 388846 - 391752 | 104160.0 |
| hypothetical protein | VPARA_03590 | Not Available | Negative | 391770 - 392018 | 9139.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
