Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipate coa-transferase subunit a | VPARA_41470 | Not Available | Negative | 4314107 - 4314808 | 24586.7 |
| pca regulon regulatory protein | VPARA_41480 | Not Available | Positive | 4314962 - 4315747 | 28277.4 |
| tripartite tricarboxylate transporter family receptor | VPARA_41490 | Not Available | Negative | 4315851 - 4316867 | 34650.3 |
| transcriptional regulatory protein degu | VPARA_41500 | Not Available | Negative | 4317022 - 4317702 | 24163.5 |
| beta-barrel assembly-enhancing protease | VPARA_41510 | Not Available | Positive | 4318093 - 4319280 | 41118.9 |
| l,d-transpeptidase catalytic domain | VPARA_41520 | Not Available | Positive | 4319340 - 4320698 | 49092.2 |
| type iv leader peptidase family protein | VPARA_41530 | Not Available | Positive | 4321316 - 4321816 | 17959.4 |
| hypothetical protein | VPARA_41540 | Not Available | Positive | 4321882 - 4322871 | 34304.6 |
| type ii secretion system protein d precursor | VPARA_41550 | Not Available | Positive | 4322894 - 4324288 | 48314.0 |
| response regulator receiver domain protein | VPARA_41560 | Not Available | Positive | 4324324 - 4325607 | 45709.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
