Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VPARA_38420 | Not Available | Negative | 4040497 - 4041543 | 39256.3 |
| demethylrebeccamycin-d-glucose o-methyltransferase | VPARA_38430 | Not Available | Negative | 4041587 - 4042546 | 35353.3 |
| hypothetical protein | VPARA_38440 | Not Available | Negative | 4042562 - 4042987 | 14762.1 |
| marr family protein | VPARA_38450 | Not Available | Negative | 4043045 - 4043650 | 22778.2 |
| radical sam superfamily protein | VPARA_38460 | Not Available | Positive | 4043768 - 4044862 | 40686.6 |
| thermoresistant gluconokinase | VPARA_38470 | Not Available | Positive | 4044977 - 4045483 | 17353.1 |
| 6-phosphogluconate dehydrogenase, nadp(+)-dependent, decarboxylating | VPARA_38480 | Not Available | Negative | 4045495 - 4046916 | 51642.1 |
| ribonuclease d | VPARA_38490 | Not Available | Negative | 4047024 - 4047632 | 22151.5 |
| hypothetical protein | VPARA_38500 | Not Available | Negative | 4047629 - 4048042 | 15357.6 |
| ycii-like protein | VPARA_38510 | Not Available | Negative | 4048039 - 4048359 | 11356.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
