Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | VPARA_37420 | Not Available | Positive | 3938846 - 3940744 | 67733.5 |
| alpha-keto acid-binding periplasmic protein takp precursor | VPARA_37430 | Not Available | Positive | 3940857 - 3941939 | 39293.2 |
| sialic acid trap transporter permease protein siat | VPARA_37440 | Not Available | Negative | 3942037 - 3943857 | 64726.4 |
| tripartite atp-independent periplasmic transporter, dctq component | VPARA_37450 | Not Available | Negative | 3943869 - 3944468 | 22593.7 |
| iron(ii)-dependent oxidoreductase egtb | VPARA_37460 | Not Available | Positive | 3944691 - 3945959 | 47113.4 |
| putative niacin/nicotinamide transporter naip | VPARA_37470 | Not Available | Negative | 3946017 - 3947456 | 51285.3 |
| pbp superfamily domain protein | VPARA_37480 | Not Available | Negative | 3947493 - 3948599 | 40413.4 |
| beta-alanine--pyruvate aminotransferase | VPARA_37490 | Not Available | Negative | 3948665 - 3950020 | 48333.9 |
| hth-type transcriptional regulator gltr | VPARA_37500 | Not Available | Positive | 3950177 - 3951076 | 32921.9 |
| hth-type transcriptional regulator lutr | VPARA_37510 | Not Available | Negative | 3951188 - 3951976 | 29978.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
