Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein icsa autotransporter precursor | VPARA_36820 | Not Available | Positive | 3876232 - 3880317 | 130967.0 |
| serine/threonine-protein kinase prkc | VPARA_36830 | Not Available | Negative | 3880345 - 3882081 | 64027.9 |
| putative formate transporter 1 | VPARA_36840 | Not Available | Negative | 3882104 - 3882916 | 29060.7 |
| siroheme synthase | VPARA_36850 | Not Available | Negative | 3882978 - 3883829 | 28753.9 |
| assimilatory nitrite reductase | VPARA_36860 | Not Available | Negative | 3883845 - 3884276 | 15197.9 |
| hypothetical protein | VPARA_36870 | Not Available | Negative | 3884291 - 3884464 | 6406.44 |
| hypothetical protein | VPARA_36880 | Not Available | Positive | 3884751 - 3884897 | 5350.91 |
| type iv leader peptidase family protein | VPARA_36890 | Not Available | Positive | 3884908 - 3885492 | 20685.3 |
| saf domain protein | VPARA_36900 | Not Available | Positive | 3885531 - 3886373 | 29434.0 |
| type ii secretion system protein d precursor | VPARA_36910 | Not Available | Positive | 3886445 - 3887905 | 50176.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
