Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dimethylallyltransferase | VPARA_31320 | Not Available | Positive | 3295789 - 3296778 | 35156.3 |
| putative abc transporter atp-binding protein | VPARA_31330 | Not Available | Positive | 3296775 - 3297422 | 22847.6 |
| l-threonine dehydratase catabolic tdcb | VPARA_31340 | Not Available | Negative | 3297424 - 3298380 | 34028.9 |
| hth-type transcriptional regulator lutr | VPARA_31350 | Not Available | Positive | 3298494 - 3299198 | 25620.8 |
| ectoine dioxygenase | VPARA_31360 | Not Available | Positive | 3299195 - 3300070 | 32873.1 |
| homoserine dehydrogenase | VPARA_31370 | Not Available | Positive | 3300075 - 3301436 | 48741.3 |
| ycii-related domain protein | VPARA_31380 | Not Available | Positive | 3301585 - 3301956 | 13171.5 |
| rna polymerase sigma factor | VPARA_31390 | Not Available | Positive | 3301953 - 3303188 | 43987.8 |
| d-alanyl-d-alanine- carboxypeptidase/endopeptidase amph precursor | VPARA_31400 | Not Available | Negative | 3303211 - 3304635 | 49820.5 |
| outer membrane-specific lipoprotein transporter subunit lolc | VPARA_31410 | Not Available | Positive | 3304667 - 3307318 | 91924.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
