Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mfs-type transporter yhjx | VPARA_30920 | Not Available | Positive | 3260842 - 3262065 | 43020.5 |
| hypothetical protein | VPARA_30930 | Not Available | Positive | 3262088 - 3262228 | 5079.26 |
| methyltransferase domain protein | VPARA_30940 | Not Available | Positive | 3262321 - 3262803 | 16981.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | VPARA_30950 | Not Available | Positive | 3262883 - 3263773 | 31890.8 |
| outer membrane protein assembly factor bamc | VPARA_30960 | Not Available | Positive | 3263913 - 3265007 | 39995.4 |
| putative metallo-hydrolase yycj | VPARA_30970 | Not Available | Positive | 3265013 - 3265789 | 27703.8 |
| hypothetical protein | VPARA_30980 | Not Available | Negative | 3265885 - 3266157 | 8525.04 |
| hypothetical protein | VPARA_30990 | Not Available | Negative | 3266251 - 3266766 | 19285.7 |
| 50s ribosomal protein l16 arginine hydroxylase | VPARA_31000 | Not Available | Negative | 3266756 - 3267901 | 41706.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | VPARA_31010 | Not Available | Positive | 3267916 - 3268440 | 18742.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
