Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamylcyclotransferase family protein ytfp | VPARA_26520 | Not Available | Positive | 2796593 - 2797021 | 15561.4 |
| isocitrate lyase | VPARA_26530 | Not Available | Positive | 2797275 - 2798594 | 48537.4 |
| threonine--trna ligase | VPARA_26540 | Not Available | Positive | 2798919 - 2800826 | 72335.5 |
| translation initiation factor if-3 | VPARA_26550 | Not Available | Positive | 2801057 - 2801545 | 18046.1 |
| 50s ribosomal protein l35 | VPARA_26560 | Not Available | Positive | 2801710 - 2801913 | 7482.51 |
| 50s ribosomal protein l20 | VPARA_26570 | Not Available | Positive | 2801938 - 2802297 | 13420.7 |
| phenylalanine--trna ligase alpha subunit | VPARA_26580 | Not Available | Positive | 2802412 - 2803488 | 40019.3 |
| phenylalanine--trna ligase beta subunit | VPARA_26590 | Not Available | Positive | 2803532 - 2805973 | 88034.0 |
| integration host factor subunit alpha | VPARA_26600 | Not Available | Positive | 2805979 - 2806350 | 13465.0 |
| hth-type transcriptional repressor ycge | VPARA_26610 | Not Available | Positive | 2806416 - 2806892 | 18627.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
