Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter family receptor | VPARA_23420 | Not Available | Positive | 2474802 - 2475770 | 33779.4 |
| alpha-ketoglutarate-dependent taurine dioxygenase | VPARA_23430 | Not Available | Positive | 2475802 - 2476644 | 31602.7 |
| 3-keto-5-aminohexanoate cleavage enzyme | VPARA_23440 | Not Available | Positive | 2476695 - 2477753 | 38907.6 |
| rhodocoxin reductase | VPARA_23450 | Not Available | Negative | 2478118 - 2479335 | 43628.2 |
| naphthalene 1,2-dioxygenase/salicylate 5-hydroxylase system, ferredoxin component | VPARA_23460 | Not Available | Negative | 2479403 - 2479726 | 11585.7 |
| salicylate 5-hydroxylase, small oxygenase component | VPARA_23470 | Not Available | Negative | 2479735 - 2480205 | 18319.7 |
| salicylate 5-hydroxylase, large oxygenase component | VPARA_23480 | Not Available | Negative | 2480207 - 2481472 | 48301.3 |
| hth-type transcriptional regulator syrm 1 | VPARA_23490 | Not Available | Positive | 2481599 - 2482513 | 33451.7 |
| pca regulon regulatory protein | VPARA_23500 | Not Available | Negative | 2482536 - 2483333 | 29364.7 |
| tripartite tricarboxylate transporter family receptor | VPARA_23510 | Not Available | Positive | 2483493 - 2484491 | 34430.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
