Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vault protein inter-alpha-trypsin | VPARA_22020 | Not Available | Positive | 2327272 - 2329347 | 75486.4 |
| transmembrane exosortase (exosortase_epsh) | VPARA_22030 | Not Available | Positive | 2329369 - 2330301 | 32452.5 |
| hypothetical protein | VPARA_22040 | Not Available | Positive | 2330282 - 2330854 | 21264.6 |
| monofunctional biosynthetic peptidoglycan transglycosylase | VPARA_22050 | Not Available | Positive | 2330886 - 2332139 | 44963.2 |
| mycothiol acetyltransferase | VPARA_22060 | Not Available | Positive | 2332136 - 2332888 | 27663.6 |
| quercetin 2,3-dioxygenase | VPARA_22070 | Not Available | Positive | 2332960 - 2333859 | 32735.7 |
| nadph-dependent fmn reductase | VPARA_22080 | Not Available | Positive | 2333914 - 2335026 | 41126.7 |
| hypothetical protein | VPARA_22090 | Not Available | Positive | 2335177 - 2335749 | 20477.2 |
| hypothetical protein | VPARA_22100 | Not Available | Negative | 2335834 - 2336262 | 14656.3 |
| hypothetical protein | VPARA_22110 | Not Available | Positive | 2336466 - 2337248 | 28795.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
