Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase cyp18 | VPARA_01300 | Not Available | Positive | 135503 - 136102 | 21413.7 |
| peptidyl-prolyl cis-trans isomerase cyp18 | VPARA_01310 | Not Available | Positive | 136133 - 136645 | 18349.7 |
| udp-2,3-diacylglucosamine hydrolase | VPARA_01320 | Not Available | Positive | 136671 - 137441 | 28499.9 |
| protein mtfa | VPARA_01330 | Not Available | Positive | 137450 - 138241 | 29301.0 |
| gyd domain protein | VPARA_01340 | Not Available | Positive | 138471 - 138764 | 10694.1 |
| hypothetical protein | VPARA_01350 | Not Available | Negative | 138852 - 141779 | 103421.0 |
| asma family protein | VPARA_01360 | Not Available | Negative | 141909 - 145688 | 133393.0 |
| membrane-bound lytic murein transglycosylase c precursor | VPARA_01370 | Not Available | Positive | 146312 - 147169 | 30337.6 |
| serine hydroxymethyltransferase 2 | VPARA_01380 | Not Available | Positive | 147355 - 148599 | 44841.9 |
| transcriptional repressor nrdr | VPARA_01390 | Not Available | Positive | 148621 - 149064 | 17093.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
