Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster insertion protein erpa | VPARA_15200 | Not Available | Positive | 1593594 - 1593959 | 12923.1 |
| putative transport protein hsra | VPARA_15210 | Not Available | Positive | 1594055 - 1595485 | 49963.8 |
| anhydro-n-acetylmuramic acid kinase | VPARA_15220 | Not Available | Negative | 1595498 - 1596625 | 38425.7 |
| murein dd-endopeptidase mepm | VPARA_15230 | Not Available | Negative | 1596657 - 1597997 | 47601.0 |
| tyrosine--trna ligase | VPARA_15240 | Not Available | Positive | 1598156 - 1599388 | 45061.1 |
| outer membrane protein precursor | VPARA_15250 | Not Available | Negative | 1599410 - 1600027 | 22234.5 |
| fecr protein | VPARA_15260 | Not Available | Negative | 1600024 - 1600518 | 16951.4 |
| ferrous-iron efflux pump fief | VPARA_15270 | Not Available | Positive | 1600658 - 1601572 | 32944.2 |
| d-tyrosyl-trna(tyr) deacylase | VPARA_15280 | Not Available | Positive | 1601569 - 1602009 | 15396.7 |
| endoribonuclease ybey | VPARA_15290 | Not Available | Negative | 1602040 - 1602498 | 17033.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
