Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cynr | VPARA_14700 | Not Available | Positive | 1540624 - 1541526 | 33071.4 |
| hypothetical protein | VPARA_14710 | Not Available | Negative | 1541777 - 1542535 | 27475.3 |
| hth-type transcriptional regulatory protein gabr | VPARA_14720 | Not Available | Negative | 1542597 - 1544042 | 52685.5 |
| udp-glucose 4-epimerase | VPARA_14730 | Not Available | Positive | 1544130 - 1544873 | 25620.7 |
| cupin domain protein | VPARA_14740 | Not Available | Positive | 1544870 - 1545409 | 18511.2 |
| rna pyrophosphohydrolase | VPARA_14750 | Not Available | Negative | 1545438 - 1545878 | 16016.1 |
| glycine cleavage system transcriptional activator | VPARA_14760 | Not Available | Negative | 1545936 - 1546802 | 31707.2 |
| tripartite tricarboxylate transporter family receptor | VPARA_14770 | Not Available | Positive | 1546994 - 1547965 | 34263.8 |
| d-threonine aldolase | VPARA_14780 | Not Available | Positive | 1548004 - 1549119 | 39430.3 |
| d-aminoacylase | VPARA_14790 | Not Available | Positive | 1549143 - 1550594 | 51712.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
