Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyguanosinetriphosphate triphosphohydrolase | VPARA_10900 | Not Available | Negative | 1136878 - 1138008 | 42610.3 |
| 3-dehydroquinate synthase | VPARA_10910 | Not Available | Negative | 1138031 - 1139143 | 39124.5 |
| shikimate kinase 1 | VPARA_10920 | Not Available | Negative | 1139177 - 1139725 | 20149.3 |
| type iv pilus biogenesis and competence protein pilq precursor | VPARA_10930 | Not Available | Negative | 1139749 - 1141809 | 73267.5 |
| pilus assembly protein, pilp | VPARA_10940 | Not Available | Negative | 1141884 - 1142426 | 20184.4 |
| pilus assembly protein, pilo | VPARA_10950 | Not Available | Negative | 1142423 - 1143106 | 25352.3 |
| fimbrial assembly protein (piln) | VPARA_10960 | Not Available | Negative | 1143114 - 1143734 | 22835.6 |
| competence protein a | VPARA_10970 | Not Available | Negative | 1143731 - 1144768 | 37428.8 |
| penicillin-binding protein 1a | VPARA_10980 | Not Available | Positive | 1145133 - 1147457 | 84329.9 |
| protein cyay | VPARA_10990 | Not Available | Negative | 1147468 - 1147800 | 12027.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
