Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain TBEA6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain TBEA6 VPARA_contig000112, whole genome
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate-binding protein precursor | VPARA_09300 | Not Available | Negative | 978668 - 979705 | 37609.7 |
| putative fe(2+)-trafficking protein | VPARA_09310 | Not Available | Positive | 979843 - 980115 | 10308.4 |
| trna 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmc | VPARA_09320 | Not Available | Positive | 980123 - 981970 | 65911.3 |
| transglutaminase-like superfamily protein | VPARA_09330 | Not Available | Positive | 981995 - 982918 | 34205.4 |
| hydroxycinnamoyl-coa hydratase-lyase | VPARA_09340 | Not Available | Negative | 983081 - 983683 | 21893.4 |
| putative enoyl-coa hydratase echa14 | VPARA_09350 | Not Available | Negative | 983674 - 984024 | 13103.4 |
| peptide methionine sulfoxide reductase msra/msrb | VPARA_09360 | Not Available | Positive | 984174 - 984875 | 25458.2 |
| fructose-bisphosphate aldolase class 1 | VPARA_09370 | Not Available | Negative | 984879 - 985910 | 36061.5 |
| 4-methylaminobutanoate oxidase (formaldehyde-forming) | VPARA_09380 | Not Available | Negative | 985966 - 987138 | 42722.0 |
| glycine cleavage system transcriptional activator | VPARA_09390 | Not Available | Positive | 987223 - 988119 | 33525.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
