Clostridium sp. IBUN125C

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. IBUN125C is a bacterium characterized by having a single replicon, which is indicative of its genetic organization and may influence its replication and maintenance of genetic material within the cell. The genomic information for this strain is cataloged under the accession number JZWF00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. As a member of the Clostridium genus, this organism is likely to exhibit traits common to anaerobic bacteria, such as the ability to ferment organic substrates. Clostridia are known for their role in various ecological processes, including the degradation of complex organic materials, which is essential for nutrient cycling in anaerobic environments. The presence of a single replicon may suggest a streamlined genetic framework, which could be advantageous for adaptation to specific ecological niches or metabolic pathways. Understanding the genomic characteristics of Clostridium sp. IBUN125C could provide insights into its ecological functions, particularly in environments where anaerobic conditions prevail. This bacterium may play a significant role in the breakdown of organic matter, contributing to soil health and the recycling of nutrients in ecosystems where it is found. Further research into its metabolic capabilities and ecological interactions could enhance our understanding of its contributions to microbial communities and biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. IBUN125C
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. IBUN125C ClosIBUN125C_CONTIG9, whole genome

Gene Summary

Adenine Count

1642457 bp

Thymine Count

1636360 bp

Guanine Count

664615 bp

Cytosine Count

653456 bp

Genome Length

4596888 bp

Protein-coding Genes

3768 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium-dependent amino acid transporter (proline, tryptophan)ClosIBUN125C_CONTIG16g00992Not AvailablePositive223511 - 22483047712.8
biosynthetic aromatic amino acid aminotransferase alpha/aspartate aminotransferaseClosIBUN125C_CONTIG16g01000Not AvailablePositive224924 - 22611144328.1
5-carboxymethyl-2-oxo-hex-3- ene-1,7-dioate decarboxylaseClosIBUN125C_CONTIG16g01018Not AvailablePositive226504 - 22693516383.9
hypothetical proteinClosIBUN125C_CONTIG16g01020Not AvailablePositive226937 - 22732914687.6
regulatory protein, asnc/lrpClosIBUN125C_CONTIG16g01017Not AvailablePositive227512 - 22794916474.2
d-alanine aminotransferaseClosIBUN125C_CONTIG16g01003Not AvailablePositive228232 - 22909532643.6
hypothetical proteinClosIBUN125C_CONTIG16g01008Not AvailablePositive229089 - 23021341177.0
hypothetical proteinClosIBUN125C_CONTIG16g01009Not AvailablePositive230241 - 23101128844.2
lactam utilization protein lambClosIBUN125C_CONTIG16g01006Not AvailablePositive231049 - 23181627775.6
hypothetical proteinClosIBUN125C_CONTIG16g00995Not AvailablePositive231934 - 23306742690.8

Displaying genes 351 – 360 of 3966 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.