Clostridium sp. IBUN125C

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. IBUN125C is a bacterium characterized by having a single replicon, which is indicative of its genetic organization and may influence its replication and maintenance of genetic material within the cell. The genomic information for this strain is cataloged under the accession number JZWF00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. As a member of the Clostridium genus, this organism is likely to exhibit traits common to anaerobic bacteria, such as the ability to ferment organic substrates. Clostridia are known for their role in various ecological processes, including the degradation of complex organic materials, which is essential for nutrient cycling in anaerobic environments. The presence of a single replicon may suggest a streamlined genetic framework, which could be advantageous for adaptation to specific ecological niches or metabolic pathways. Understanding the genomic characteristics of Clostridium sp. IBUN125C could provide insights into its ecological functions, particularly in environments where anaerobic conditions prevail. This bacterium may play a significant role in the breakdown of organic matter, contributing to soil health and the recycling of nutrients in ecosystems where it is found. Further research into its metabolic capabilities and ecological interactions could enhance our understanding of its contributions to microbial communities and biogeochemical cycles.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. IBUN125C
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. IBUN125C ClosIBUN125C_CONTIG9, whole genome

Gene Summary

Adenine Count

1642457 bp

Thymine Count

1636360 bp

Guanine Count

664615 bp

Cytosine Count

653456 bp

Genome Length

4596888 bp

Protein-coding Genes

3768 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphosugar-binding transcriptional regulator, rpir familyClosIBUN125C_CONTIG56g03053Not AvailablePositive2703713 - 270445028352.4
pts system, cellobiose-specific iic componentClosIBUN125C_CONTIG56g03038Not AvailablePositive2704836 - 270613446089.8
pts system, cellobiose-specific iia componentClosIBUN125C_CONTIG56g03069Not AvailablePositive2706319 - 270663912015.5
pts system, cellobiose-specific iib componentClosIBUN125C_CONTIG56g03070Not AvailablePositive2706742 - 270705011109.0
6-phospho-beta-glucosidaseClosIBUN125C_CONTIG56g03037Not AvailablePositive2707118 - 270854854545.4
transcriptional regulator, gntr family domain / aspartate aminotransferaseClosIBUN125C_CONTIG56g03017Not AvailablePositive2708999 - 271033952051.7
6-phospho-beta-glucosidaseClosIBUN125C_CONTIG56g03091Not AvailableNegative2710493 - 271180648739.3
hypothetical proteinClosIBUN125C_CONTIG56g03029Not AvailablePositive2712337 - 271404062120.0
hypothetical proteinClosIBUN125C_CONTIG56g03027Not AvailablePositive2714144 - 271621977191.4
phosphosugar-binding transcriptional regulator, rpir familyClosIBUN125C_CONTIG56g03099Not AvailableNegative2716283 - 271703228568.3

Displaying genes 2481 – 2490 of 3966 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.