Brevundimonas sp. KM4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Brevundimonas

Description

Brevundimonas sp. KM4 is a rod-shaped bacterium characterized by a single replicon. This single replicon may suggest a streamlined genome organization that can be advantageous in various environmental conditions. The accession number for Brevundimonas sp. KM4 is JZRG00000000.1, which serves as a reference for genomic data related to this strain. The genus Brevundimonas is known for its metabolic versatility and potential roles in various ecological niches. While specific metabolic pathways and ecological interactions of Brevundimonas sp. KM4 are not detailed here, members of the Brevundimonas genus are often found in diverse environments, including soil, water, and as part of microbial communities associated with plants. Understanding the characteristics and ecological roles of Brevundimonas sp. KM4 contributes to the broader knowledge of microbial diversity and function. Further studies on this strain could reveal its potential applications in biotechnology or environmental management, particularly given the importance of bacteria in nutrient cycling and bioremediation processes. The ecological insights gained from studying such microorganisms can help inform strategies for harnessing their capabilities in various scientific and industrial fields.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusBrevundimonas
SpeciesBrevundimonas sp. KM4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brevundimonas sp. KM4 contig_62, whole genome shotgun sequence.

Gene Summary

Adenine Count

522929 bp

Thymine Count

523176 bp

Guanine Count

1023209 bp

Cytosine Count

1029889 bp

Genome Length

3099203 bp

Protein-coding Genes

2906 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
penicillin-binding proteinVH88_01275B8H0A0Positive274084 - 27586864282.8
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseVH88_01280Q9A595Positive275865 - 27732550199.9
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseVH88_01285Q9AKP1Positive277318 - 27875749216.8
phospho-n-acetylmuramoyl-pentapeptide- transferaseVH88_01290B8H097Positive278767 - 27987639457.2
udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetaseVH88_01295Q9A597Positive279881 - 28140751770.0
cell division protein ftswVH88_01300B8H092Positive281404 - 28257942173.5
udp-diphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseVH88_01305Q9A5A1Positive282974 - 28407138286.1
mechanosensitive ion channel protein mscsVH88_01310Not AvailablePositive284086 - 28523142927.2
hypothetical proteinVH88_01315Not AvailableNegative285200 - 28562214531.0
chromosome segregation protein smcVH88_01320B8GZ28Negative285808 - 289245122706.0

Displaying genes 251 – 260 of 2956 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

201 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da

Displaying 1–10 of 201 metabolites

Health Effects

No health effects information available for this bacterium.