Terrabacter sp. 28

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Intrasporangiaceae

Genus

Terrabacter

Description

Terrabacter sp. 28 is a bacterial strain characterized by its single replicon, indicating a simplified genomic structure compared to other bacteria that may possess multiple replicons. The strain is cataloged under the accession number JYOE00000000.1, which provides a reference for its genetic and genomic information. The single replicon may suggest a streamlined evolutionary adaptation, possibly allowing for efficient replication and resource utilization in its environment. This trait is commonly observed in various bacterial taxa, where a single replicon can facilitate rapid growth and adaptation to changing conditions. While specific ecological roles and metabolic capabilities of Terrabacter sp. 28 are not detailed in the provided information, the presence of such bacteria in diverse environments often indicates their potential contributions to nutrient cycling and soil health. They can play critical roles in the degradation of organic matter and the maintenance of soil microbial diversity. In summary, Terrabacter sp. 28's singular replicon and its classification under the accession JYOE00000000.1 highlight its genetic simplicity, which may reflect ecological strategies that enable adaptation to its niche, potentially influencing soil ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyIntrasporangiaceae
GenusTerrabacter
SpeciesTerrabacter sp. 28
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Terrabacter sp. 28 contig119, whole genome shotgun sequence.

Gene Summary

Adenine Count

697888 bp

Thymine Count

697031 bp

Guanine Count

1734061 bp

Cytosine Count

1746099 bp

Genome Length

4876735 bp

Protein-coding Genes

3812 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotidaseUB45_09245O34313Negative2017921 - 201970562903.0
hypothetical proteinUB45_09250P9WL20Negative2019976 - 202173663991.5
metalloproteaseUB45_09255Q871C5Negative2021876 - 202283832914.3
hypothetical proteinUB45_09260Not AvailableNegative2022982 - 202329311451.3
glutamate racemaseUB45_09265A5UTG1Negative2023290 - 202415329380.0
hypothetical proteinUB45_09270Q82D55Negative2024155 - 202471520005.6
dead/deah box helicaseUB45_09275Not AvailableNegative2024745 - 202640360099.2
dna repair proteinUB45_09280Not AvailablePositive2026455 - 202710523607.2
hypothetical proteinUB45_09285Not AvailablePositive2027124 - 202794229569.4
daunorubicin resistance protein drrcUB45_09295Q9WYV0Negative2029061 - 203145184906.3

Displaying genes 1611 – 1620 of 3866 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

294 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 294 metabolites

Health Effects

No health effects information available for this bacterium.