Pseudomonas libanensis strain DSM 17149 46_593_22.0107

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas libanensis strain DSM 17149 46_593_22.0107 is an aerobic bacterium, indicating that it requires oxygen for its metabolic processes. This trait is important for understanding its ecological role and potential applications in environments where oxygen is present. The strain has a single replicon, which is characteristic of its genomic structure, suggesting a streamlined genome that may facilitate efficient replication and adaptation to its environment. The genomic data for this strain is accessible under the accession number JYLH00000000.1, providing a resource for researchers interested in further studies on its genetics, metabolism, and potential applications in biotechnology or environmental microbiology. The aerobic nature of Pseudomonas libanensis suggests that it may play a role in nutrient cycling within oxygen-rich environments, such as soils and aquatic systems. Its presence in these ecosystems could contribute to the degradation of organic matter, highlighting its potential role in bioremediation processes. Understanding the specific capabilities and ecological interactions of this strain can facilitate future research into its applications in environmental management and industrial processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas libanensis
Strainstrain DSM 17149 46_593_22.0107

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas libanensis strain DSM 17149 46_593_22.0107
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas libanensis strain DSM 17149 46_593_22.0107, whole

Gene Summary

Adenine Count

1241430 bp

Thymine Count

1232987 bp

Guanine Count

1856450 bp

Cytosine Count

1883367 bp

Genome Length

6214234 bp

Protein-coding Genes

5367 genes

Non-Coding Genes

110 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinTU73_10560Not AvailableNegative2430234 - 243058412374.5
Putative major tail proteinTU73_10565P85503Negative2430593 - 243108417385.3
hypothetical proteinTU73_10570Not AvailableNegative2431177 - 24313686778.1
Tail proteinTU73_10575P10312Negative2431441 - 243245136713.1
Phage tail xTU73_10580Not AvailableNegative2432461 - 24326737903.57
Putative tail proteinTU73_10585B0ZSH1Negative2432666 - 243304914112.9
phage tail length tape measure proteinTU73_10590Not AvailableNegative2433049 - 243487263180.5
Hypothetical proteinTU73_10595Not AvailableNegative2435000 - 243557221151.3
Putative tail tube proteinTU73_10600Not AvailableNegative2435753 - 243625918350.4
Major tail sheath proteinTU73_10605Not AvailableNegative2436259 - 243742541774.8

Displaying genes 11 – 20 of 5477 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

361 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 361 metabolites

Health Effects

No health effects information available for this bacterium.