Pseudomonas taetrolens strain DSM 21104 26_500_0.77748

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas taetrolens strain DSM 21104 (accession JYLA00000000.1) is an aerobic bacterium characterized by its single replicon. As a member of the Pseudomonas genus, it is expected to exhibit metabolic versatility, which is a hallmark of many species within this group. The strain's aerobic nature indicates that it requires oxygen for its growth and metabolic processes, suggesting a potential role in environments where oxygen is readily available. This trait may also facilitate its participation in various ecological processes, including nutrient cycling and biodegradation, given the general capabilities of Pseudomonas species to degrade a wide range of organic compounds. Understanding the characteristics of Pseudomonas taetrolens, particularly its aerobic metabolism and genomic structure with a single replicon, can provide insights into its ecological roles and potential applications. Aerobic bacteria like P. taetrolens are often involved in the decomposition of organic materials, thus playing a critical role in maintaining environmental health and stability. Their metabolic processes can contribute to soil fertility and the degradation of pollutants, making them significant players in both natural ecosystems and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas taetrolens
Strainstrain DSM 21104 26_500_0.77748

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas taetrolens strain DSM 21104 26_500_0.77748
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas taetrolens strain DSM 21104 26_500_0.77748


Gene Summary

Adenine Count

1022776 bp

Thymine Count

1031599 bp

Guanine Count

1444214 bp

Cytosine Count

1423315 bp

Genome Length

4921904 bp

Protein-coding Genes

4270 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive254 - 1800Not Available
radical sam proteinTU78_00005Not AvailableNegative313 - 128135242.1
tetr family transcriptional regulatorTU78_00010Not AvailableNegative1424 - 206525038.1
hydrolase tatdTU78_00015Not AvailableNegative2574 - 335328444.8
dna polymerase iii subunit delta'TU78_00020Not AvailableNegative3389 - 437536097.1
thymidylate kinaseTU78_00025Not AvailableNegative4368 - 500022939.6
aminodeoxychorismate lyaseTU78_00030Not AvailableNegative5023 - 610840109.1
4-amino-4-deoxychorismate lyaseTU78_00035Not AvailableNegative6112 - 693029519.8
3-oxoacyl-acp synthaseTU78_00040Not AvailableNegative6930 - 817443225.3
acyl carrier proteinTU78_00045Not AvailableNegative8286 - 85228643.01

Displaying genes 51 – 60 of 4373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001848D-lysineC6H14N2O2Chemical structure of D-lysine923-27-3
Average146.19Da
Monoisotopic146.1055277Da
BASm0001850D-arginineC6H15N4O2Chemical structure of D-arginine0157-06-02
Average175.2089Da
Monoisotopic175.1195007Da
BASm0003070D-methionineC5H11NO2SChemical structure of D-methionine348-67-4
Average149.211Da
Monoisotopic149.0510493Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.