Pseudomonas taetrolens strain DSM 21104 26_500_0.77748

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas taetrolens strain DSM 21104 (accession JYLA00000000.1) is an aerobic bacterium characterized by its single replicon. As a member of the Pseudomonas genus, it is expected to exhibit metabolic versatility, which is a hallmark of many species within this group. The strain's aerobic nature indicates that it requires oxygen for its growth and metabolic processes, suggesting a potential role in environments where oxygen is readily available. This trait may also facilitate its participation in various ecological processes, including nutrient cycling and biodegradation, given the general capabilities of Pseudomonas species to degrade a wide range of organic compounds. Understanding the characteristics of Pseudomonas taetrolens, particularly its aerobic metabolism and genomic structure with a single replicon, can provide insights into its ecological roles and potential applications. Aerobic bacteria like P. taetrolens are often involved in the decomposition of organic materials, thus playing a critical role in maintaining environmental health and stability. Their metabolic processes can contribute to soil fertility and the degradation of pollutants, making them significant players in both natural ecosystems and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas taetrolens
Strainstrain DSM 21104 26_500_0.77748

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas taetrolens strain DSM 21104 26_500_0.77748
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas taetrolens strain DSM 21104 26_500_0.77748, whole

Gene Summary

Adenine Count

1022776 bp

Thymine Count

1031599 bp

Guanine Count

1444214 bp

Cytosine Count

1423315 bp

Genome Length

4921904 bp

Protein-coding Genes

4270 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methylmalonate-semialdehyde dehydrogenaseTU78_20480Not AvailablePositive4473972 - 447548653733.7
3-hydroxyisobutyrate dehydrogenaseTU78_20485Not AvailablePositive4475497 - 447638430082.4
cupinTU78_20490Not AvailableNegative4476440 - 447678413144.8
aromatic amino acid transporterTU78_20495Not AvailableNegative4476923 - 447832650589.2
lysr family transcriptional regulatorTU78_20500Not AvailableNegative4478466 - 447935032404.2
membrane proteinTU78_20505Not AvailablePositive4479458 - 448022226918.0
antibiotic biosynthesis monooxygenaseTU78_20510Not AvailableNegative4480212 - 448052612480.9
nadph quinone reductase mdabTU78_20515Not AvailablePositive4480728 - 448131822281.4
lysr family transcriptional regulatorTU78_20520Not AvailablePositive4481373 - 448228433926.6
gamma-glutamyltranspeptidaseTU78_20525Not AvailablePositive4482639 - 448430659882.2

Displaying genes 4001 – 4010 of 4373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001848D-lysineC6H14N2O2Chemical structure of D-lysine923-27-3
Average146.19Da
Monoisotopic146.1055277Da
BASm0001850D-arginineC6H15N4O2Chemical structure of D-arginine0157-06-02
Average175.2089Da
Monoisotopic175.1195007Da
BASm0003070D-methionineC5H11NO2SChemical structure of D-methionine348-67-4
Average149.211Da
Monoisotopic149.0510493Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.