Pseudomonas taetrolens strain DSM 21104 26_500_0.77748

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas taetrolens strain DSM 21104 (accession JYLA00000000.1) is an aerobic bacterium characterized by its single replicon. As a member of the Pseudomonas genus, it is expected to exhibit metabolic versatility, which is a hallmark of many species within this group. The strain's aerobic nature indicates that it requires oxygen for its growth and metabolic processes, suggesting a potential role in environments where oxygen is readily available. This trait may also facilitate its participation in various ecological processes, including nutrient cycling and biodegradation, given the general capabilities of Pseudomonas species to degrade a wide range of organic compounds. Understanding the characteristics of Pseudomonas taetrolens, particularly its aerobic metabolism and genomic structure with a single replicon, can provide insights into its ecological roles and potential applications. Aerobic bacteria like P. taetrolens are often involved in the decomposition of organic materials, thus playing a critical role in maintaining environmental health and stability. Their metabolic processes can contribute to soil fertility and the degradation of pollutants, making them significant players in both natural ecosystems and biotechnological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas taetrolens
Strainstrain DSM 21104 26_500_0.77748

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas taetrolens strain DSM 21104 26_500_0.77748
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas taetrolens strain DSM 21104 26_500_0.77748, whole

Gene Summary

Adenine Count

1022776 bp

Thymine Count

1031599 bp

Guanine Count

1444214 bp

Cytosine Count

1423315 bp

Genome Length

4921904 bp

Protein-coding Genes

4270 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
omega amino acid--pyruvate aminotransferaseTU78_16480Not AvailableNegative3592065 - 359341448786.4
lysr family transcriptional regulatorTU78_16485Not AvailablePositive3593538 - 359445834360.2
tetr family transcriptional regulatorTU78_16490Not AvailablePositive3594516 - 359516624316.2
thymidylate synthaseTU78_16495Not AvailablePositive3595178 - 359578022003.2
calcium:proton antiporterTU78_16500Not AvailableNegative3596269 - 359735438751.5
adenine deaminaseTU78_16505Not AvailablePositive3597578 - 359853136247.1
lysr family transcriptional regulatorTU78_16510Not AvailableNegative3598656 - 359956733632.6
nadph:quinone reductaseTU78_16515Not AvailablePositive3599692 - 360070536190.5
major facilitator transporterTU78_16520Not AvailableNegative3601012 - 360220841517.1
heavy metal transporterTU78_16525Not AvailableNegative3602341 - 36025416934.3

Displaying genes 3261 – 3270 of 4373 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001848D-lysineC6H14N2O2Chemical structure of D-lysine923-27-3
Average146.19Da
Monoisotopic146.1055277Da
BASm0001850D-arginineC6H15N4O2Chemical structure of D-arginine0157-06-02
Average175.2089Da
Monoisotopic175.1195007Da
BASm0003070D-methionineC5H11NO2SChemical structure of D-methionine348-67-4
Average149.211Da
Monoisotopic149.0510493Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.