Pseudomonas sp. 10-1B

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 10-1B is characterized by having a single replicon, which indicates a streamlined genomic organization that may contribute to its adaptability in various environments. The organism is classified under the genus Pseudomonas, known for its metabolic versatility and ability to thrive in diverse ecological niches. The genomic accession for Pseudomonas sp. 10-1B is JYKS00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. Pseudomonas species are often associated with soil and water environments, where they play crucial roles in nutrient cycling and organic matter decomposition. The presence of a single replicon may suggest a more efficient replication and regulation of essential genes, potentially enhancing the organism's survival and growth in competitive environments. This trait, coupled with the ecological versatility commonly associated with Pseudomonas, highlights its potential role in bioremediation and biotechnological applications. In summary, Pseudomonas sp. 10-1B's single replicon structure may confer advantages in adaptability and survival, reinforcing the ecological significance of the Pseudomonas genus in environmental microbiology. Further studies on its genomic features could provide insights into its functional capabilities and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 10-1B
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 10-1B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 10-1B contig_102, whole genome shotgun sequence.

Gene Summary

Adenine Count

1196591 bp

Thymine Count

1186740 bp

Guanine Count

1972978 bp

Cytosine Count

1990205 bp

Genome Length

6346514 bp

Protein-coding Genes

5361 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane proteinTZ03_04025Not AvailablePositive943270 - 94388722913.3
kinaseTZ03_04030Not AvailablePositive943892 - 94475231041.1
Trna-glnNot AvailableNot AvailablePositive944773 - 944847Not Available
ribose-phosphate pyrophosphokinaseTZ03_04040Not AvailablePositive944896 - 94583734194.3
50s ribosomal protein l25TZ03_04045Not AvailablePositive945959 - 94655221082.1
peptidyl-trna hydrolaseTZ03_04050Not AvailablePositive946632 - 94721620962.2
gtp-binding proteinTZ03_04055Not AvailablePositive947241 - 94834139986.0
ligand-gated channelTZ03_04060Not AvailableNegative948477 - 95081385811.9
iron dicitrate transport regulator fecrTZ03_04065Not AvailableNegative951016 - 95197235427.4
rna polymerase sigma factorTZ03_04070Not AvailableNegative951969 - 95247519447.5

Displaying genes 781 – 790 of 5432 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.