Pseudomonas sp. 10-1B

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 10-1B is characterized by having a single replicon, which indicates a streamlined genomic organization that may contribute to its adaptability in various environments. The organism is classified under the genus Pseudomonas, known for its metabolic versatility and ability to thrive in diverse ecological niches. The genomic accession for Pseudomonas sp. 10-1B is JYKS00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. Pseudomonas species are often associated with soil and water environments, where they play crucial roles in nutrient cycling and organic matter decomposition. The presence of a single replicon may suggest a more efficient replication and regulation of essential genes, potentially enhancing the organism's survival and growth in competitive environments. This trait, coupled with the ecological versatility commonly associated with Pseudomonas, highlights its potential role in bioremediation and biotechnological applications. In summary, Pseudomonas sp. 10-1B's single replicon structure may confer advantages in adaptability and survival, reinforcing the ecological significance of the Pseudomonas genus in environmental microbiology. Further studies on its genomic features could provide insights into its functional capabilities and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 10-1B
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 10-1B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 10-1B contig_102, whole genome shotgun sequence.

Gene Summary

Adenine Count

1196591 bp

Thymine Count

1186740 bp

Guanine Count

1972978 bp

Cytosine Count

1990205 bp

Genome Length

6346514 bp

Protein-coding Genes

5361 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l22TZ03_26185Not AvailableNegative5928497 - 592882911911.6
30s ribosomal protein s19TZ03_26190Not AvailableNegative5928841 - 592911610348.9
50s ribosomal protein l2TZ03_26195Not AvailableNegative5929133 - 592995729671.0
50s ribosomal protein l23TZ03_26200Not AvailableNegative5929972 - 593027110900.2
50s ribosomal protein l4TZ03_26205Not AvailableNegative5930268 - 593087021812.3
50s ribosomal protein l3TZ03_26210Not AvailableNegative5930883 - 593151822604.2
30s ribosomal protein s10TZ03_26215Not AvailableNegative5931599 - 593191011753.3
transcriptional regulator pdhrTZ03_26220Not AvailableNegative5932225 - 593299228712.1
l-lactate permeaseTZ03_26225Not AvailablePositive5933249 - 593491958934.0
lactate dehydrogenaseTZ03_26230Not AvailablePositive5934983 - 593612841354.1

Displaying genes 5101 – 5110 of 5432 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.