Pseudomonas sp. 10-1B

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 10-1B is characterized by having a single replicon, which indicates a streamlined genomic organization that may contribute to its adaptability in various environments. The organism is classified under the genus Pseudomonas, known for its metabolic versatility and ability to thrive in diverse ecological niches. The genomic accession for Pseudomonas sp. 10-1B is JYKS00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. Pseudomonas species are often associated with soil and water environments, where they play crucial roles in nutrient cycling and organic matter decomposition. The presence of a single replicon may suggest a more efficient replication and regulation of essential genes, potentially enhancing the organism's survival and growth in competitive environments. This trait, coupled with the ecological versatility commonly associated with Pseudomonas, highlights its potential role in bioremediation and biotechnological applications. In summary, Pseudomonas sp. 10-1B's single replicon structure may confer advantages in adaptability and survival, reinforcing the ecological significance of the Pseudomonas genus in environmental microbiology. Further studies on its genomic features could provide insights into its functional capabilities and interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 10-1B
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 10-1B
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 10-1B contig_102, whole genome shotgun sequence.

Gene Summary

Adenine Count

1196591 bp

Thymine Count

1186740 bp

Guanine Count

1972978 bp

Cytosine Count

1990205 bp

Genome Length

6346514 bp

Protein-coding Genes

5361 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
erfk/ybis/ycfs/ynhg family proteinTZ03_25685Not AvailableNegative5827922 - 582889934800.1
hypothetical proteinTZ03_25690Not AvailableNegative5829006 - 582929611015.5
esteraseTZ03_25695Not AvailableNegative5829355 - 582996021248.8
abc transporterTZ03_25700Not AvailablePositive5829971 - 583065424406.3
abc transporter permeaseTZ03_25705Not AvailablePositive5830654 - 583316188513.0
sulfite oxidaseTZ03_25710Not AvailableNegative5833532 - 583414323149.5
sulfoxide reductase catalytic subunit yedyTZ03_25715Not AvailableNegative5834143 - 583515637676.9
cdp-diacylglycerol--serine o-phosphatidyltransferaseTZ03_25720Not AvailableNegative5835236 - 583608730361.0
ketol-acid reductoisomeraseTZ03_25725Not AvailableNegative5836238 - 583725436386.6
acetolactate synthase 3 regulatory subunitTZ03_25730Not AvailableNegative5837310 - 583780117785.5

Displaying genes 5001 – 5010 of 5432 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.