Pseudoalteromonas ruthenica strain S3137

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas ruthenica strain S3137 is a rod-shaped bacterium characterized by having a single replicon. This organism is part of the genus Pseudoalteromonas, which is known for its diverse metabolic capabilities and ecological roles in marine environments. The specific accession number for this strain is JXXZ00000000.1, which serves as a unique identifier for genomic studies and further research. Pseudoalteromonas species are often associated with marine ecosystems, where they play significant roles in nutrient cycling and can interact with other microbial communities. Their rod shape may influence their motility and nutrient uptake in aquatic environments. The fact that P. ruthenica strain S3137 possesses only one replicon suggests a streamlined genomic organization, which might correlate with its adaptation to specific ecological niches. This trait could also indicate a potential for efficient replication and resource use, which is advantageous in competitive marine environments. Overall, the study of Pseudoalteromonas ruthenica strain S3137 offers insights into the diversity of marine bacteria and their ecological roles, particularly in nutrient cycling and interactions within microbial communities. These traits highlight the importance of understanding microbial life in ocean ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas ruthenica
Strainstrain S3137

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas ruthenica strain S3137


Gene Summary

Adenine Count

1071653 bp

Thymine Count

1068817 bp

Guanine Count

964643 bp

Cytosine Count

961522 bp

Genome Length

4066635 bp

Protein-coding Genes

3470 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhomboid family proteinTW72_00045Q8VZ48Negative8567 - 964941053.9
hypothetical proteinTW72_00050Not AvailableNegative9642 - 1025023217.6
manganese transporterTW72_00055Q49WM9Negative10333 - 1152941196.5
transcriptional regulatorTW72_00060Q51506Negative11740 - 1219517148.8
carnitine--coa ligaseTW72_00070Not AvailablePositive13091 - 1378325890.0
transporterTW72_00075A8AI45Negative13875 - 1465128168.9
curli production assembly protein csgfTW72_00080Not AvailableNegative14651 - 1506415295.4
curli production assembly protein csgeTW72_00085Not AvailableNegative15067 - 1545614643.8
curlinTW72_00090Not AvailableNegative15493 - 1700151620.4
peptidase s8TW72_00095Q45670Positive17825 - 2032987239.5

Displaying genes 11 – 20 of 3546 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

189 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da

Displaying 1–10 of 189 metabolites

Health Effects

No health effects information available for this bacterium.