Rhodopseudomonas palustris strain BAL398

BacilliMotilefacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas palustris strain BAL398 is a Gram-negative, bacilli-shaped bacterium characterized as a facultative anaerobe. This organism can thrive in various habitats, including aquatic and stratified aquatic environments, as well as terrestrial ecosystems. BAL398 exhibits a single-cell arrangement and possesses flagella, enabling mobility. The optimal growth temperature for this strain is 25°C, situating it within the mesophilic temperature range. Genetic analysis reveals that it has one replicon, indicating a relatively simple genetic architecture. As a free-living organism, R. palustris strain BAL398 plays a role in its ecosystem by engaging in various biotic interactions, contributing to nutrient cycling and potentially influencing the microbial community structure in its environments. The adaptability of R. palustrons strain BAL398 to both aquatic and terrestrial habitats underscores its ecological versatility and highlights its importance in different environmental contexts. Its facultative anaerobic nature allows it to survive and perform metabolic functions under varying oxygen conditions, contributing to its ecological resilience and functional role in diverse ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas palustris
Strainstrain BAL398

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodopseudomonas palustris strain BAL398
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperature25
Temperature rangeMesophilic
Habitataquatic; stratified aquatic environments; terrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodopseudomonas palustris strain BAL398 c13239l1018c233.552063,

Gene Summary

Adenine Count

1094646 bp

Thymine Count

1097214 bp

Guanine Count

1968532 bp

Cytosine Count

1963566 bp

Genome Length

6123958 bp

Protein-coding Genes

5566 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase sigma factor rpodOO17_22070Not AvailablePositive4589455 - 459021627207.8
udp-n-acetylmuramate--alanine ligaseOO17_22075Not AvailableNegative4590217 - 459104529587.6
arabinose transporter permeaseOO17_22085Not AvailableNegative4592386 - 459355839231.0
lysr family transcriptional regulatorOO17_22090Not AvailablePositive4593670 - 459457532613.7
udp-diphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseOO17_22095Not AvailableNegative4594616 - 459571637881.7
cell division protein ftswOO17_22100Not AvailableNegative4595721 - 459687841595.6
udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetaseOO17_22105Not AvailableNegative4597255 - 459865549005.6
phospho-n-acetylmuramoyl-pentapeptide- transferaseOO17_22110Not AvailableNegative4598847 - 459993238598.1
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseOO17_22115Not AvailableNegative4599943 - 460138250062.4
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseOO17_22120Not AvailableNegative4601379 - 460286951266.2

Displaying genes 4131 – 4140 of 5632 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

89 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001885Tetra-mu3-sulfido-tetrairon(1+)Fe4S4Chemical structure of Tetra-mu3-sulfido-tetrairon(1+)Not available
Average351.62Da
Monoisotopic351.62748Da
BASm0001989hopan-22-olC30H52OChemical structure of hopan-22-olNot available
Average428.745Da
Monoisotopic428.4018163Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da
BASm00034972-C-methyl-D-erythritol 2,4-cyclic diphosphateC5H10O9P2Chemical structure of 2-C-methyl-D-erythritol 2,4-cyclic diphosphate143488-44-2
Average276.075Da
Monoisotopic275.9800049Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0008099(2E)-4-hydroxy-3-methylbut-2-enyl diphosphateC5H9O8P2Chemical structure of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphateNot available
Average259.0677Da
Monoisotopic258.9772653Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da

Displaying 1–10 of 89 metabolites

Health Effects

No health effects information available for this bacterium.