Lysobacter sp. A03

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter sp. A03 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for possessing a single replicon, which is a defining feature of its genetic structure. The accession number for this strain is JXSS00000000.1, indicating its availability in genomic databases for further research and analysis. Lysobacter species are known for their ecological roles, particularly in soil and plant-associated environments. They are often associated with the degradation of organic matter and can play a role in the biocontrol of plant pathogens due to their antimicrobial properties. The ability to thrive in diverse habitats suggests that Lysobacter sp. A03 may contribute to nutrient cycling and promote soil health. Further studies could elucidate the specific ecological interactions of Lysobacter sp. A03, especially its potential applications in agriculture and bioremediation. Understanding the traits of this bacterium can provide insights into its functional capabilities and the broader implications for microbial communities in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter sp. A03
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter sp. A03
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter sp. A03 NODE_62, whole genome shotgun sequence.

Gene Summary

Adenine Count

490220 bp

Thymine Count

489106 bp

Guanine Count

944063 bp

Cytosine Count

940903 bp

Genome Length

2864292 bp

Protein-coding Genes

2560 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxyphenylpyruvate dioxygenaseTI01_1243Not AvailableNegative1373072 - 137416340620.1
transcriptional regulator, marr familyTI01_1244Not AvailablePositive1374262 - 137477118785.4
di-/tripeptide transporterTI01_1245Not AvailableNegative1374889 - 137652658499.1
tryptophan 2,3-dioxygenaseTI01_1246Not AvailableNegative1376704 - 137756132589.1
branched-chain alpha-keto acid dehydrogenase, e1 component, alpha subunitTI01_1247Not AvailablePositive1377697 - 137877039737.2
branched-chain alpha-keto acid dehydrogenase, e1 component, beta subunitTI01_1248Not AvailablePositive1378767 - 137979236864.4
lipopolysaccharide abc transporter, atp-binding protein lptbTI01_1249Not AvailableNegative1381426 - 138214525928.5
lpta, protein essential for lps transport across the periplasmTI01_1250Not AvailableNegative1382145 - 138269319142.8
yrbk-like proteinTI01_1251Not AvailableNegative1382683 - 138321019264.7
3-deoxy-d-manno-octulosonate 8-phosphate phosphataseTI01_1252Not AvailableNegative1383240 - 138384221370.7

Displaying genes 1241 – 1250 of 2610 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.