Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | RT97_05140 | Not Available | Negative | 1108316 - 1109635 | 47939.5 |
| atp-dependent dna ligase | RT97_05145 | Not Available | Negative | 1110866 - 1113412 | 92871.2 |
| hypothetical protein | RT97_05150 | Not Available | Negative | 1113897 - 1114160 | 9784.54 |
| dna polymerase | RT97_05155 | Not Available | Negative | 1114415 - 1117531 | 116308.0 |
| dna polymerase | RT97_05160 | Not Available | Negative | 1117538 - 1118893 | 49736.0 |
| hypothetical protein | RT97_05165 | Not Available | Positive | 1119018 - 1119215 | 7357.01 |
| aldehyde dehydrogenase | RT97_05170 | Not Available | Negative | 1120548 - 1122002 | 51014.3 |
| l-dehydroascorbate transporter large permease subunit | RT97_05175 | Not Available | Negative | 1122039 - 1123316 | 45171.9 |
| amidohydrolase | RT97_05180 | Not Available | Negative | 1123339 - 1123842 | 18131.9 |
| amidohydrolase | RT97_05185 | Not Available | Negative | 1123875 - 1124819 | 34893.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
