Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_05030 | Not Available | Negative | 1086346 - 1086525 | 6753.11 |
| hypothetical protein | RT97_05035 | Not Available | Negative | 1086863 - 1087093 | 9022.71 |
| histidine kinase | RT97_05040 | Not Available | Negative | 1087386 - 1089080 | 61347.9 |
| circadian clock protein kaic | RT97_05045 | Not Available | Negative | 1089085 - 1090587 | 54041.9 |
| hypothetical protein | RT97_05050 | Not Available | Negative | 1091022 - 1091360 | 12019.2 |
| hypothetical protein | RT97_05055 | Not Available | Positive | 1092138 - 1092452 | 11460.5 |
| hypothetical protein | RT97_05060 | Not Available | Negative | 1093505 - 1093840 | 11921.3 |
| hypothetical protein | RT97_05065 | Not Available | Positive | 1094184 - 1094828 | 24120.0 |
| molecular chaperone groes | RT97_05070 | Not Available | Positive | 1094995 - 1095315 | 11684.3 |
| molecular chaperone groel | RT97_05075 | Not Available | Positive | 1095366 - 1096994 | 56896.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
