Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock hsp20 | RT97_04970 | Not Available | Negative | 1064798 - 1065235 | 15969.1 |
| hypothetical protein | RT97_04975 | Not Available | Negative | 1065290 - 1065628 | 12315.8 |
| hypothetical protein | RT97_04985 | Not Available | Positive | 1068401 - 1068601 | 7268.68 |
| hypothetical protein | RT97_04990 | Not Available | Negative | 1068711 - 1071023 | 84667.2 |
| arac family transcriptional regulator | RT97_04995 | Not Available | Negative | 1071025 - 1071861 | 30017.5 |
| hypothetical protein | RT97_05000 | Not Available | Positive | 1072107 - 1080149 | 269296.0 |
| hypothetical protein | RT97_05010 | Not Available | Positive | 1084513 - 1084797 | 10405.1 |
| hypothetical protein | RT97_05015 | Not Available | Positive | 1084915 - 1085283 | 12879.2 |
| hypothetical protein | RT97_05020 | Not Available | Negative | 1085588 - 1085833 | 8764.46 |
| hypothetical protein | RT97_05025 | Not Available | Negative | 1085951 - 1086271 | 11361.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
