Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase | RT97_04910 | Not Available | Negative | 1049831 - 1051987 | 78997.9 |
| hypothetical protein | RT97_04915 | Not Available | Positive | 1052523 - 1052750 | 8449.11 |
| carnitine dehydratase | RT97_04925 | Not Available | Positive | 1053922 - 1055142 | 43428.9 |
| hypothetical protein | RT97_04930 | Not Available | Positive | 1055148 - 1056413 | 46829.5 |
| abc transporter substrate-binding protein | RT97_04935 | Not Available | Positive | 1056443 - 1057417 | 33906.7 |
| hypothetical protein | RT97_04940 | Not Available | Positive | 1057985 - 1058530 | 19375.8 |
| dehydratase | RT97_04945 | Not Available | Positive | 1059336 - 1060196 | 30780.2 |
| low temperature requirement protein a | RT97_04955 | Not Available | Negative | 1062062 - 1063189 | 41813.9 |
| glyoxalase | RT97_04960 | Not Available | Negative | 1063477 - 1063866 | 14400.1 |
| heat-shock protein hsp20 | RT97_04965 | Not Available | Negative | 1064371 - 1064787 | 14927.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
