Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn-dependent nadh-azoreductase | RT97_04840 | Not Available | Positive | 1033446 - 1034054 | 20869.2 |
| nadp oxidoreductase coenzyme | RT97_04845 | Not Available | Positive | 1034095 - 1034682 | 20136.5 |
| hypothetical protein | RT97_04855 | Not Available | Negative | 1036865 - 1037221 | 12967.5 |
| 4-amino-4-deoxychorismate mutase | RT97_04860 | Not Available | Negative | 1038223 - 1038507 | 10728.1 |
| receptor | RT97_04865 | Not Available | Negative | 1038621 - 1039673 | 36794.9 |
| hypothetical protein | RT97_04870 | Not Available | Negative | 1040117 - 1041463 | 49500.4 |
| cobyrinic acid a,c-diamide synthase | RT97_04875 | Not Available | Positive | 1042078 - 1043268 | 43277.9 |
| hypothetical protein | RT97_04885 | Not Available | Positive | 1045605 - 1045934 | 11972.5 |
| hypothetical protein | RT97_04895 | Not Available | Negative | 1048370 - 1048591 | 7671.53 |
| hypothetical protein | RT97_04900 | Not Available | Negative | 1048730 - 1049029 | 11040.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
