Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_04780 | Not Available | Negative | 1021934 - 1022140 | 7467.84 |
| enoyl-coa hydratase | RT97_04785 | Not Available | Positive | 1022277 - 1023086 | 29135.3 |
| transcriptional regulator | RT97_04795 | Not Available | Positive | 1024137 - 1024262 | 4499.67 |
| gentamicin 3'-acetyltransferase | RT97_04800 | Not Available | Negative | 1024344 - 1024820 | 17400.8 |
| membrane protein | RT97_04805 | Not Available | Positive | 1025216 - 1025644 | 15952.0 |
| hypothetical protein | RT97_04810 | Not Available | Positive | 1025958 - 1026554 | 21831.0 |
| hypothetical protein | RT97_04815 | Not Available | Positive | 1027115 - 1027564 | 16041.2 |
| histidine kinase | RT97_04820 | Not Available | Negative | 1027890 - 1029629 | 62393.0 |
| hypothetical protein | RT97_04825 | Not Available | Positive | 1030947 - 1031147 | 7020.17 |
| lysr family transcriptional regulator | RT97_04835 | Not Available | Negative | 1032362 - 1033282 | 32594.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
