Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RT97_04730 | Not Available | Positive | 1009248 - 1010222 | 34295.6 |
| hypothetical protein | RT97_04735 | Not Available | Negative | 1010361 - 1011500 | 42045.9 |
| membrane protein | RT97_04740 | Not Available | Negative | 1011572 - 1012177 | 21424.5 |
| dioxygenase | RT97_04745 | Not Available | Negative | 1012270 - 1012683 | 15438.4 |
| polysaccharide biosynthesis protein gumn | RT97_04750 | Not Available | Positive | 1012736 - 1014010 | 44378.6 |
| hypothetical protein | RT97_04755 | Not Available | Positive | 1014022 - 1014405 | 13217.4 |
| tonb-dependent receptor | RT97_04760 | Not Available | Positive | 1014521 - 1016812 | 82702.6 |
| hypothetical protein | RT97_04765 | Not Available | Positive | 1016847 - 1017761 | 31078.5 |
| phospholipase d | RT97_04770 | Not Available | Negative | 1017771 - 1019570 | 64200.4 |
| abc transporter atp-binding protein | RT97_04775 | Not Available | Negative | 1019675 - 1021570 | 69532.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
