Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_04680 | Not Available | Negative | 999890 - 1000735 | 29789.9 |
| membrane protein | RT97_04685 | Not Available | Positive | 1000823 - 1001896 | 37283.8 |
| hypothetical protein | RT97_04690 | Not Available | Negative | 1001943 - 1002221 | 10435.1 |
| hypothetical protein | RT97_04695 | Not Available | Negative | 1002332 - 1003516 | 40975.9 |
| fumarylacetoacetate hydrolase | RT97_04700 | Not Available | Positive | 1003649 - 1004722 | 38786.1 |
| xre family transcriptional regulator | RT97_04705 | Not Available | Positive | 1004883 - 1005137 | 8921.79 |
| phosphatidylinositol kinase | RT97_04710 | Not Available | Positive | 1005134 - 1006393 | 46712.4 |
| luxr family transcriptional regulator | RT97_04715 | Not Available | Negative | 1006390 - 1007172 | 28386.1 |
| fad-dependent oxidoreductase | RT97_04720 | Not Available | Positive | 1007251 - 1009014 | 63729.7 |
| hypothetical protein | RT97_04725 | Not Available | Positive | 1009011 - 1009244 | 8317.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
