Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | RT97_04630 | Not Available | Negative | 987473 - 988183 | 26296.3 |
| amp-dependent synthetase | RT97_04635 | Not Available | Positive | 988270 - 989883 | 57979.8 |
| carbamoyl-phosphate synthase large subunit | RT97_04640 | Not Available | Positive | 989894 - 993187 | 115482.0 |
| gdsl family lipase | RT97_04645 | Not Available | Positive | 993292 - 994572 | 44962.6 |
| signal peptide protein | RT97_04650 | Not Available | Positive | 994703 - 995077 | 14131.7 |
| hypothetical protein | RT97_04655 | Not Available | Negative | 995118 - 996362 | 43337.9 |
| hypothetical protein | RT97_04660 | Not Available | Negative | 996359 - 997063 | 24005.8 |
| formyltetrahydrofolate deformylase | RT97_04665 | Not Available | Negative | 997128 - 997994 | 31861.1 |
| omega amino acid--pyruvate aminotransferase | RT97_04670 | Not Available | Positive | 998065 - 999399 | 48425.3 |
| glyoxalase | RT97_04675 | Not Available | Negative | 999470 - 999847 | 13218.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
