Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_04580 | Not Available | Positive | 974323 - 974997 | 23632.8 |
| arginase | RT97_04585 | Not Available | Negative | 975008 - 975919 | 32375.8 |
| prolyl oligopeptidase | RT97_04590 | Not Available | Negative | 975955 - 978009 | 76006.5 |
| acyltransferase | RT97_04595 | Not Available | Positive | 978189 - 979883 | 60470.2 |
| hypothetical protein | RT97_04600 | Not Available | Positive | 980016 - 980576 | 19353.4 |
| poly granule associated family protein | RT97_04605 | Not Available | Positive | 980631 - 981128 | 17463.1 |
| tetr family transcriptional regulator | RT97_04610 | Not Available | Positive | 981151 - 981786 | 23437.1 |
| alpha/beta hydrolase | RT97_04615 | Not Available | Positive | 981882 - 982655 | 27778.4 |
| nadph--cytochrome p450 reductase | RT97_04620 | Not Available | Negative | 982847 - 986065 | 118636.0 |
| amino acid abc transporter substrate-binding protein | RT97_04625 | Not Available | Negative | 986195 - 987451 | 44947.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
