Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoheptose isomerase | RT97_04530 | Not Available | Positive | 965363 - 966007 | 21905.2 |
| transporter | RT97_04535 | Not Available | Positive | 966004 - 966783 | 26960.3 |
| oxidoreductase | RT97_04540 | Not Available | Negative | 966814 - 967722 | 31227.4 |
| twitching motility protein pilt | RT97_04545 | Not Available | Negative | 967790 - 968926 | 41813.4 |
| twitching motility protein pilt | RT97_04550 | Not Available | Negative | 969068 - 970111 | 38197.2 |
| hypothetical protein | RT97_04555 | Not Available | Positive | 970163 - 970864 | 24693.8 |
| arsr family transcriptional regulator | RT97_04560 | Not Available | Negative | 970877 - 971344 | 17536.6 |
| hypothetical protein | RT97_04565 | Not Available | Negative | 971483 - 971944 | 15762.3 |
| glutamate dehydrogenase | RT97_04570 | Not Available | Positive | 972186 - 973457 | 45757.2 |
| fructose transporter | RT97_04575 | Not Available | Positive | 973582 - 974238 | 23469.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
