Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | RT97_04475 | Not Available | Negative | 953637 - 954299 | 22114.3 |
| multidrug transporter | RT97_04480 | Not Available | Negative | 954416 - 955837 | 50714.2 |
| acriflavine resistance protein b | RT97_04485 | Not Available | Negative | 955830 - 958994 | 112463.0 |
| rnd transporter | RT97_04490 | Not Available | Negative | 959011 - 960321 | 44582.4 |
| tetr family transcriptional regulator | RT97_04495 | Not Available | Positive | 960501 - 961172 | 24490.4 |
| Trna-arg | Not Available | Not Available | Positive | 961215 - 961289 | Not Available |
| transporter | RT97_04505 | Not Available | Positive | 961434 - 962654 | 41857.6 |
| glutathione s-transferase | RT97_04515 | Not Available | Positive | 963172 - 963900 | 26916.8 |
| 16s rrna methyltransferase | RT97_04520 | Not Available | Negative | 963897 - 964853 | 32950.3 |
| hypothetical protein | RT97_04525 | Not Available | Positive | 964902 - 965276 | 13339.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
