Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe(ii) oxygenase | RT97_04420 | Not Available | Negative | 945062 - 946063 | 36666.4 |
| transcriptional regulator | RT97_04425 | Not Available | Positive | 946266 - 946973 | 26270.6 |
| fmn reductase | RT97_04430 | Not Available | Negative | 946975 - 947511 | 18441.1 |
| malonic semialdehyde reductase | RT97_04435 | Not Available | Negative | 947528 - 948124 | 21400.4 |
| aminoacrylate hydrolase | RT97_04440 | Not Available | Negative | 948121 - 948927 | 28223.7 |
| aminoacrylate peracid reductase | RT97_04445 | Not Available | Negative | 948933 - 949325 | 13724.6 |
| pyrimidine monooxygenase | RT97_04455 | Not Available | Negative | 950158 - 951270 | 40592.4 |
| ketosteroid isomerase | RT97_04460 | Not Available | Positive | 951487 - 951939 | 16170.1 |
| alpha/beta hydrolase | RT97_04465 | Not Available | Positive | 951978 - 953000 | 36662.8 |
| hypothetical protein | RT97_04470 | Not Available | Positive | 953005 - 953568 | 20689.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
