Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_04370 | Not Available | Negative | 936321 - 936851 | 19874.7 |
| membrane protein | RT97_04375 | Not Available | Negative | 936854 - 937768 | 30479.8 |
| lema | RT97_04380 | Not Available | Negative | 937781 - 938374 | 22066.1 |
| hypothetical protein | RT97_04385 | Not Available | Positive | 938428 - 939177 | 27125.9 |
| isochorismatase | RT97_04390 | Not Available | Negative | 939182 - 939856 | 25132.8 |
| abc transporter permease | RT97_04395 | Not Available | Negative | 939853 - 940788 | 32492.6 |
| abc transporter permease | RT97_04400 | Not Available | Negative | 940788 - 941948 | 41253.2 |
| abc transporter atp-binding protein | RT97_04405 | Not Available | Negative | 941941 - 943476 | 54098.1 |
| bis(5'-nucleosyl)-tetraphosphatase | RT97_04410 | Not Available | Negative | 943496 - 944599 | 39191.9 |
| glyoxalase | RT97_04415 | Not Available | Negative | 944662 - 945048 | 14411.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
