Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0f1 subunit c | RT97_04270 | Not Available | Positive | 915309 - 915572 | 8966.35 |
| atp synthase subunit b | RT97_04275 | Not Available | Positive | 915650 - 916120 | 16781.3 |
| atp synthase f0f1 subunit delta | RT97_04280 | Not Available | Positive | 916129 - 916659 | 18307.0 |
| atp f0f1 synthase subunit alpha | RT97_04285 | Not Available | Positive | 916708 - 918321 | 57704.2 |
| atp f0f1 synthase subunit gamma | RT97_04290 | Not Available | Positive | 918355 - 919230 | 31491.3 |
| hypothetical protein | RT97_04295 | Not Available | Positive | 919319 - 919702 | 12193.5 |
| atp synthase f0f1 subunit beta | RT97_04300 | Not Available | Positive | 919829 - 921229 | 50267.4 |
| atp synthase f0f1 subunit epsilon | RT97_04305 | Not Available | Positive | 921248 - 921667 | 14760.7 |
| transcriptional regulator | RT97_04310 | Not Available | Positive | 921896 - 923065 | 40762.6 |
| abc transporter atp-binding protein | RT97_04315 | Not Available | Positive | 923131 - 924615 | 53633.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
