Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RT97_04210 | Not Available | Negative | 904401 - 905732 | 48377.2 |
| abc transporter permease | RT97_04215 | Not Available | Negative | 905804 - 906868 | 38537.3 |
| abc transporter permease | RT97_04220 | Not Available | Negative | 906964 - 907893 | 32963.7 |
| hypothetical protein | RT97_04230 | Not Available | Positive | 908804 - 909775 | 36827.5 |
| lipoyl synthase | RT97_04240 | Not Available | Negative | 910815 - 911798 | 36641.1 |
| lipoate--protein ligase | RT97_04245 | Not Available | Negative | 911806 - 912486 | 24360.3 |
| hypothetical protein | RT97_04250 | Not Available | Negative | 912523 - 912831 | 11136.2 |
| cytochrome c550 | RT97_04255 | Not Available | Negative | 912828 - 913721 | 32326.0 |
| atp synthase subunit i | RT97_04260 | Not Available | Positive | 913879 - 914364 | 17483.6 |
| atp synthase subunit a | RT97_04265 | Not Available | Positive | 914369 - 915238 | 31542.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
