Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | RT97_00350 | Not Available | Negative | 70099 - 71148 | 35839.4 |
| cobalamin biosynthesis protein cobq | RT97_00355 | Not Available | Negative | 71145 - 72611 | 51817.1 |
| hypothetical protein | RT97_00360 | Not Available | Positive | 72761 - 73003 | 8944.49 |
| rnd transporter | RT97_00365 | Not Available | Negative | 72972 - 74444 | 51553.0 |
| hypothetical protein | RT97_00370 | Not Available | Negative | 74475 - 74732 | 8846.72 |
| hypothetical protein | RT97_00375 | Not Available | Positive | 74741 - 75070 | 12385.9 |
| dna ligase | RT97_00380 | Not Available | Negative | 75077 - 75931 | 31365.7 |
| enoyl-acp reductase | RT97_00385 | Not Available | Negative | 76001 - 76783 | 27402.8 |
| peptide abc transporter substrate-binding protein | RT97_00390 | Not Available | Positive | 76821 - 78632 | 67968.0 |
| microcin abc transporter permease | RT97_00395 | Not Available | Positive | 78651 - 79691 | 38167.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
