Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | RT97_04050 | Not Available | Negative | 866132 - 866608 | 18181.0 |
| salicylyl-coa 5-hydroxylase | RT97_04055 | Not Available | Negative | 866610 - 868994 | 87874.0 |
| cyclopropane-fatty-acyl-phospholipid synthase | RT97_04060 | Not Available | Positive | 869117 - 870388 | 47125.4 |
| hypothetical protein | RT97_04065 | Not Available | Positive | 870401 - 870724 | 11654.8 |
| mfs transporter | RT97_04070 | Not Available | Negative | 870842 - 871861 | 35218.6 |
| lysr family transcriptional regulator | RT97_04075 | Not Available | Negative | 871926 - 872852 | 33628.7 |
| oxidoreductase | RT97_04080 | Not Available | Positive | 872977 - 873744 | 25655.6 |
| pyruvate dehydrogenase | RT97_04085 | Not Available | Negative | 873774 - 874739 | 33756.9 |
| acetoin dehydrogenase | RT97_04090 | Not Available | Negative | 874730 - 875749 | 34911.2 |
| hypothetical protein | RT97_04095 | Not Available | Negative | 875818 - 876237 | 15571.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
