Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | RT97_04000 | Not Available | Positive | 857863 - 858486 | 23538.2 |
| dna-directed rna polymerase subunit alpha | RT97_04005 | Not Available | Positive | 858626 - 859615 | 36184.6 |
| 50s ribosomal protein l17 | RT97_04010 | Not Available | Positive | 859703 - 860101 | 14912.4 |
| Trna-met | Not Available | Not Available | Positive | 860120 - 860196 | Not Available |
| phosphohydrolase | RT97_04020 | Not Available | Negative | 860307 - 860951 | 23876.4 |
| arac family transcriptional regulator | RT97_04025 | Not Available | Positive | 861066 - 862040 | 34633.8 |
| endoribonuclease l-psp | RT97_04030 | Not Available | Negative | 862061 - 862459 | 14649.7 |
| 2-aminobenzoate-coa ligase | RT97_04035 | Not Available | Negative | 862456 - 864078 | 58041.1 |
| acyl-coa dehydrogenase | RT97_04040 | Not Available | Negative | 864084 - 865277 | 42431.2 |
| enoyl-coa hydratase | RT97_04045 | Not Available | Negative | 865281 - 866135 | 30544.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
