Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s14 | RT97_03950 | Not Available | Positive | 852545 - 852850 | 11354.8 |
| 30s ribosomal protein s8 | RT97_03955 | Not Available | Positive | 852871 - 853266 | 14076.3 |
| 50s ribosomal protein l6 | RT97_03960 | Not Available | Positive | 853291 - 853824 | 19022.2 |
| 50s ribosomal protein l18 | RT97_03965 | Not Available | Positive | 853839 - 854204 | 12709.3 |
| 30s ribosomal protein s5 | RT97_03970 | Not Available | Positive | 854223 - 854741 | 18023.1 |
| 50s ribosomal protein l30 | RT97_03975 | Not Available | Positive | 854767 - 854952 | 6762.44 |
| 50s ribosomal protein l15 | RT97_03980 | Not Available | Positive | 854964 - 855395 | 14582.1 |
| preprotein translocase subunit secy | RT97_03985 | Not Available | Positive | 855423 - 856736 | 47357.1 |
| 30s ribosomal protein s13 | RT97_03990 | Not Available | Positive | 856951 - 857316 | 13801.0 |
| 30s ribosomal protein s11 | RT97_03995 | Not Available | Positive | 857329 - 857733 | 14142.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
