Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate abc transporter substrate-binding protein | RT97_03900 | Not Available | Positive | 844822 - 845829 | 36732.1 |
| lysr family transcriptional regulator | RT97_03905 | Not Available | Positive | 845911 - 846876 | 35554.4 |
| ferritin | RT97_03910 | Not Available | Positive | 847011 - 847592 | 21111.3 |
| 4-hydroxybenzoate polyprenyltransferase | RT97_03915 | Not Available | Positive | 847687 - 848547 | 31593.0 |
| dehydratase | RT97_03920 | Not Available | Positive | 848558 - 849025 | 17290.8 |
| pyrroline-5-carboxylate reductase | RT97_03925 | Not Available | Negative | 849032 - 849889 | 29432.2 |
| hypothetical protein | RT97_03930 | Not Available | Negative | 849886 - 851055 | 41724.7 |
| 50s ribosomal protein l14 | RT97_03935 | Not Available | Positive | 851271 - 851639 | 13181.3 |
| 50s ribosomal protein l24 | RT97_03940 | Not Available | Positive | 851653 - 851985 | 11816.5 |
| 50s ribosomal protein l5 | RT97_03945 | Not Available | Positive | 851997 - 852536 | 20098.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
